Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCCAGGTT
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001353891
GeneSymbolSH3KBP1
Binding site4152,4162
Score0.846
Seed1
Au0.426
Energy-15.6
Binding len10
Me-14.466
Phylopstem7.928228888888889
Phylopflank4.371730357874998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure