Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCCTTCAGCCTCATGCCCAACTTGAAGCTGCT
..(((((((((((((.(((((&.))))))))))....)).........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014926
GeneSymbolSLITRK3
Binding site1788,1827
Score1.0
Seed1
Au0.515
Energy-20.4
Binding len33
Me-5.19
Phylopstem0.5645749076923077
Phylopflank2.7451043575
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end7
PositionCDS
2D Structure