Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTACAGTGGCCAGGTT
(((((((.(((..(((((((..&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014927
GeneSymbolCNKSR2
Binding site5478,5496
Score0.846
Seed1
Au0.5
Energy-18.6
Binding len18
Me-10.887
Phylopstem1.1968044285714288
Phylopflank1.95142581375
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure