Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGAGGTGTAGCTGCT
..(((((((((.((..((((.&))))..)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014929
GeneSymbolFASTKD2
Binding site3218,3237
Score1.0
Seed1
Au0.574
Energy-21.6
Binding len19
Me-9.272
Phylopstem0.04603755555555552
Phylopflank-0.03786754000000006
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure