Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGCTCCGCCTCTGGGCAACACGCGGCTGCAC
.(((((((((((((((.((((&.))))....))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014931
GeneSymbolPPP6R1
Binding site1626,1660
Score0.923
Seed1
Au0.309
Energy-28.2
Binding len26
Me-3.793
Phylopstem2.8397360625
Phylopflank3.264286775
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure