Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTACGCCCGCGGCTCAGCT
..((((((((((.((((.(((&))).)))).))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014931
GeneSymbolPPP6R1
Binding site1543,1565
Score0.846
Seed1
Au0.279
Energy-23.1
Binding len22
Me-6.246
Phylopstem3.9513005833333334
Phylopflank2.3388400837499996
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure