Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCGGTAGCTGCT
..((((((((.(((((.....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014939
GeneSymbolTRAPPC8
Binding site283,298
Score0.923
Seed1
Au0.206
Energy-22.2
Binding len15
Me-7.782
Phylopstem0.4252817875
Phylopflank2.04212407
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure