Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGATTCTACCTGTTCCTAATTTGGTGTGGGGTGCGGGGTCC
.(((((((((.(((...((((&.)))).))).))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014944
GeneSymbolCLSTN1
Binding site4470,4513
Score0.923
Seed1
Au0.426
Energy-28.5
Binding len20
Me-7.587
Phylopstem-0.9875319
Phylopflank-0.6342190498750002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure