Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGCAGCAGCAGCTGGAGT
((.(((((((.(((((..(((&)))..))))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014944
GeneSymbolCLSTN1
Binding site3661,3683
Score0.923
Seed0
Au0.338
Energy-23.2
Binding len22
Me-8.32
Phylopstem4.597424428571428
Phylopflank4.6275277275
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure