Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGG
((((((((((((((((((((.&))))..)))))))))....................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014948
GeneSymbolUBOX5
Binding site3995,4038
Score0.923
Seed1
Au0.426
Energy-20.2
Binding len43
Me-3.938
Phylopstem3.2368200428571434
Phylopflank2.643437825
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure