Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACTTGGCTTATTCAATTTCTAAAGCACTTACGTTGTGCCAGGTT
(((((((..(((((((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014953
GeneSymbolDIS3
Binding site3889,3936
Score0.923
Seed1
Au0.618
Energy-21.2
Binding len18
Me-7.308
Phylopstem-0.4285027444444444
Phylopflank-0.17987551624999995
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure