Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCCAGGTT
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001353894
GeneSymbolSH3KBP1
Binding site3644,3654
Score0.923
Seed1
Au0.426
Energy-15.6
Binding len10
Me-14.466
Phylopstem3.6248641111111106
Phylopflank3.6064071925000007
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure