Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGGAAGGAGAAGGG
..((..(((((((((((((...&)))))))))))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001353894
GeneSymbolSH3KBP1
Binding site28,46
Score1.0
Seed0
Au0.441
Energy-23.7
Binding len18
Me-10.977
Phylopstem2.6644931538461543
Phylopflank2.1526897555555555
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end5
Position5UTR
2D Structure