Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGAAAGTCAGGACCGCGACGGCAGCAGAGCAGA
((((.(((((.(((((..(((&.)))))))).)))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014960
GeneSymbolARSG
Binding site221,259
Score0.846
Seed0
Au0.456
Energy-21.9
Binding len23
Me-10.881
Phylopstem-0.9909468
Phylopflank0.0371630162499999
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position5UTR
2D Structure