Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAGCATTTCAGCTGCT
..(((((((..((((((((((&))))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014961
GeneSymbolRUFY3
Binding site3342,3364
Score0.923
Seed1
Au0.544
Energy-24.2
Binding len22
Me-9.024
Phylopstem0.6717751799999999
Phylopflank0.15729743499999999
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure