Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCGGCAGCAGCTGGAT
.(.(((((((.((((.((((.&)))))))).))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014961
GeneSymbolRUFY3
Binding site1788,1807
Score0.846
Seed0
Au0.456
Energy-19.9
Binding len19
Me-8.409
Phylopstem6.080965714285715
Phylopflank5.4187083
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure