Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTACAACCCAGTCCTTGATAATACCAGATTCTCGGTGCAT
.((((((((.(((((((((((&))))).)))))))))).......................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014961
GeneSymbolRUFY3
Binding site2352,2396
Score0.846
Seed1
Au0.559
Energy-19.7
Binding len44
Me-5.036
Phylopstem0.5012257583333334
Phylopflank0.37094338000000004
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end8
Position3UTR
2D Structure