Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGGCCAGCAGCCAGGCGGC
((((.(((((((((((.((((&)))))))))).)))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353894
GeneSymbolSH3KBP1
Binding site1656,1680
Score1.0
Seed0
Au0.353
Energy-23.3
Binding len24
Me-8.057
Phylopstem1.3369103333333332
Phylopflank1.8689616323749996
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure