Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTGCGGCTGCTGAAGGAGCTGCGGC
(((((((((((((((((.(((&))).)))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014966
GeneSymbolDHX30
Binding site3625,3653
Score0.846
Seed1
Au0.265
Energy-24.6
Binding len28
Me-3.938
Phylopstem5.033801652173912
Phylopflank4.0728769675
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure