Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGGCCAGGCTGCAGC
((((((((..((((.(((((.&))))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014967
GeneSymbolFAN1
Binding site2894,2914
Score0.923
Seed1
Au0.368
Energy-22.1
Binding len20
Me-6.972
Phylopstem2.650877375
Phylopflank2.38695978
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure