Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAACCCAGACACTCTTGCAT
.((((((((.(((((((((((&))))))))))))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014974
GeneSymbolDIP2C
Binding site3470,3496
Score0.885
Seed1
Au0.471
Energy-23.2
Binding len26
Me-5.036
Phylopstem4.503439545454546
Phylopflank5.161053912499998
Longest consecutive pairings14
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure