Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCAAGACGATCTCTCTGAGGGCCGCAGCAGCAAG
((((.(((((((((.(.(((.&.))).).))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014975
GeneSymbolMAST1
Binding site1111,1150
Score1.0
Seed0
Au0.397
Energy-24.1
Binding len22
Me-8.792
Phylopstem2.384143333333333
Phylopflank1.8106118125
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure