Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAAGACCCCAGTAGCAGCTGCAGG
((((((((((((((....(((&)))...))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014975
GeneSymbolMAST1
Binding site2232,2259
Score0.923
Seed1
Au0.324
Energy-22.8
Binding len27
Me-4.906
Phylopstem1.001735095
Phylopflank3.814113375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure