Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGTGGCAACTGCAGCA
.....(((((((((((.....&.))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353895
GeneSymbolSH3KBP1
Binding site637,655
Score0.923
Seed0
Au0.456
Energy-20.2
Binding len13
Me-13.666
Phylopstem-0.08793306363636365
Phylopflank0.49341814474999995
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure