Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCCCGCAGTTGACAT
.(((((((((((..((.((((&)))).))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014979
GeneSymbolSV2C
Binding site3456,3476
Score0.981
Seed1
Au0.353
Energy-21.3
Binding len20
Me-5.939
Phylopstem-0.4654625833333333
Phylopflank-0.32320178749999995
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure