Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAAGCCTGCAGCTGCT
..((((((((((((((.....&))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014979
GeneSymbolSV2C
Binding site8139,8157
Score0.923
Seed1
Au0.412
Energy-21.2
Binding len18
Me-4.957
Phylopstem0.2786602
Phylopflank-0.15527980224999993
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure