Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGCCAGGTT
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001353897
GeneSymbolSH3KBP1
Binding site3070,3080
Score0.923
Seed1
Au0.426
Energy-15.6
Binding len10
Me-14.466
Phylopstem2.5358662222222224
Phylopflank3.6332492212500003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure