Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTTGCCTCATTTTGGCAGATCTACAGTATGCCAT
...((((((((..(((((((((&.))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014982
GeneSymbolPCNX1
Binding site9392,9432
Score0.923
Seed0
Au0.632
Energy-21.3
Binding len19
Me-11.15
Phylopstem0.4833333333333333
Phylopflank0.32568749999999996
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure