Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTTGCTCTGCGGCATGTC
..((((((((((..((((((.&)))))).....))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014982
GeneSymbolPCNX1
Binding site6117,6140
Score0.846
Seed1
Au0.529
Energy-20.3
Binding len23
Me-7.103
Phylopstem4.013624818181818
Phylopflank4.961403188749999
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure