Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTACAAGGTGTGCCCCCATCAGGTG
(((((((((((..(((((((((&)))))))))..)))))))......)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014983
GeneSymbolHMGXB3
Binding site3618,3647
Score0.923
Seed1
Au0.456
Energy-23.7
Binding len29
Me-8.574
Phylopstem5.411123370588236
Phylopflank3.85845413875
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure