Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTCCACACTGCAGCTGCT
..(((((((((((((...(((&)))....)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014983
GeneSymbolHMGXB3
Binding site2499,2521
Score0.846
Seed1
Au0.412
Energy-23.2
Binding len22
Me-5.19
Phylopstem3.6319834285714285
Phylopflank3.8809887437499992
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure