Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTACAACCGCCTCATGGACTTCCTCACCAGCCGCGAA
((((.((((((((((((((((&)))).)))))))))..................))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014983
GeneSymbolHMGXB3
Binding site4128,4169
Score0.923
Seed0
Au0.5
Energy-23.3
Binding len41
Me-8.057
Phylopstem5.61514940857143
Phylopflank3.6667032474999997
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure