Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAAGCAACAGAAGCAGA
((((..(((..((((((((((&))))))))).)..)))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014985
GeneSymbolCEP152
Binding site3554,3577
Score1.0
Seed0
Au0.559
Energy-20.0
Binding len23
Me-14.025
Phylopstem1.422055090909091
Phylopflank1.5253436976749994
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure