Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTCTCGGACCGCAGCA
.....((((((((((..((((&))))..)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353897
GeneSymbolSH3KBP1
Binding site769,787
Score0.923
Seed0
Au0.529
Energy-19.0
Binding len18
Me-13.899
Phylopstem0.030567054545454518
Phylopflank0.18461731537499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure