Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCGACCCCAGCTGCT
..(((((((.(((((.(((..&.)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014996
GeneSymbolPLCH1
Binding site570,588
Score1.0
Seed1
Au0.441
Energy-23.2
Binding len18
Me-6.433
Phylopstem0.14298525714285715
Phylopflank0.43915380000000004
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure