Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGGCCGTGGCTGTGAA
(((((((((((((((......&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014999
GeneSymbolRAB21
Binding site186,202
Score0.846
Seed1
Au0.176
Energy-22.3
Binding len16
Me-4.171
Phylopstem0.3351475333333333
Phylopflank0.372073194
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure