Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCATAACCAAGAGAACTCAGGTAGCTGCAT
.(((((((((((((((..(((&))).))))))............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015000
GeneSymbolSTK38L
Binding site1468,1500
Score1.0
Seed1
Au0.544
Energy-20.6
Binding len32
Me-3.793
Phylopstem2.6463538888888887
Phylopflank2.8097897325000005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure