Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACAGCCGATCCTCAGACCGGAGTGGAAGCTGTAGC
((((((((.((((((((((((&))))))))))))...................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015001
GeneSymbolSPEN
Binding site2622,2662
Score0.846
Seed1
Au0.485
Energy-22.7
Binding len40
Me-4.994
Phylopstem3.586529
Phylopflank3.5708433614999997
Longest consecutive pairings12
Position of longest consecutive pairings28
Pairings in 3prime end8
PositionCDS
2D Structure