Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCATCCCAGCAGATCGAACTGTCTCCCATTTGGCAGCTGCAAA
((((((((((((.(((..(((&)))..))).))..........................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015001
GeneSymbolSPEN
Binding site9372,9420
Score0.846
Seed1
Au0.471
Energy-22.7
Binding len48
Me-5.227
Phylopstem1.4756608684210526
Phylopflank2.2773590749999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure