Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGACATCGGCCGTGTCTCCAGCACCTGCCGGCGGCTGCGC
.((((((((((((....((((&.)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015002
GeneSymbolFBXO21
Binding site161,203
Score0.846
Seed1
Au0.294
Energy-22.6
Binding len19
Me-5.619
Phylopstem-0.34885323076923075
Phylopflank-0.18894968625
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end4
PositionCDS
2D Structure