Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCTGGCCGCGGCGCAGC
((((.(((((((((((..(((&)))..)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015009
GeneSymbolPDZRN3
Binding site713,735
Score0.923
Seed0
Au0.294
Energy-23.4
Binding len22
Me-8.057
Phylopstem1.2456835916666669
Phylopflank1.8437708312500005
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure