Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAATGGTAGCTGCGAC
((((((((((.((((......&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015012
GeneSymbolTMEM41B
Binding site3401,3417
Score0.923
Seed1
Au0.662
Energy-20.0
Binding len16
Me-6.995
Phylopstem4.65547
Phylopflank5.1796724525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure