Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGAGATGTTATCTGGGAAGAAGGCGGCAGCCGCGGCGGCGGC
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015013
GeneSymbolKDM1A
Binding site122,167
Score1.0
Seed0
Au0.279
Energy-25.0
Binding len18
Me-8.057
Phylopstem1.1031115454545455
Phylopflank0.9963814593
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure