Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCCAGT
..(((((((((...........&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015016
GeneSymbolMAST3
Binding site5111,5121
Score0.846
Seed1
Au0.397
Energy-16.2
Binding len10
Me-11.418
Phylopstem-0.324276
Phylopflank-0.21547649125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure