Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAGCCGCGGCTGCT
..((((((((((((.(.....&).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015017
GeneSymbolUSP33
Binding site13,28
Score0.846
Seed1
Au0.298
Energy-24.7
Binding len15
Me-5.692
Phylopstem2.7086264166666667
Phylopflank0.5094440137500001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure