Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCAACTGAGTCAACGGTTGCAGG
(((((((((((((((..((((&))))..))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015027
GeneSymbolPDXDC1
Binding site1251,1279
Score0.923
Seed1
Au0.588
Energy-22.6
Binding len28
Me-4.171
Phylopstem0.06541965714285712
Phylopflank0.03134821749999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure