Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGATGACCGCAGCAGTT
..((.(((((((((((((((.&))))..))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015027
GeneSymbolPDXDC1
Binding site1554,1575
Score1.0
Seed0
Au0.471
Energy-21.9
Binding len21
Me-9.076
Phylopstem-0.3836104117647059
Phylopflank-0.0714557674999999
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure