Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAGCAGCAGCTACTGCAT
.(((((((((.((((((((((&)))))))))).))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015028
GeneSymbolTNIK
Binding site1719,1743
Score0.923
Seed1
Au0.544
Energy-24.7
Binding len24
Me-6.618
Phylopstem0.6972914
Phylopflank0.7053883837499998
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure