Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCATCAGCCGCAGCTCTGTTTACTAGCGAA
(((((((((((((((......&.)))))))))))..........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015028
GeneSymbolTNIK
Binding site3326,3357
Score0.962
Seed1
Au0.529
Energy-21.6
Binding len27
Me-4.171
Phylopstem0.942559044
Phylopflank1.8060882799999998
Longest consecutive pairings11
Position of longest consecutive pairings15
Pairings in 3prime end2
PositionCDS
2D Structure