Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGGCAGCTGTGGATCTGGCTGCAT
.(((((((((((((((...((&))..))))))))......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015029
GeneSymbolPOP1
Binding site998,1024
Score1.0
Seed1
Au0.485
Energy-19.4
Binding len26
Me-3.793
Phylopstem5.502670057142856
Phylopflank2.6440126937499997
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure